Have to concur with all of the above.
I had to scroll right to see the full page and I'm running at 1280x1024. You need to bring that down to fit in 1024x768 at least in my opinion.
Some of the font sizes are way too large. Plus, font sizes are different on some pages than others. Looks like you're using Bold fonts too, I'd take that out, and use a more neutral font like Tahoma/Verdana or something to that effect
Love the picture you used on top by the way, but it could easily be scaled down a bit or cropped in to fit a smaller page
The references page is badly formatted. I'd have a contant colour throughout and just let bold or a single line sererate each reference. Something simple.
And I'll be harsh (because you told me to

)... I won't lie, there's a lot of little things that need to be fixed first before I could really delve into the nitty gritty. Even after fixing all that I'd probably start rethinking the layout, like the left menu doesn't kinda fit for some reason. Can't put my finger on it...
anyway that should get you started!