As above there was no iPhone 9 (it went from the iPhone 8 to the iPhone X/10) also the Fuji 2000HD was released in 2009 not 2003, the S7000 and S5000 were their bridge models in 2003.
The answer depends on a lot of factors, exactly which iPhone and Fuji it is plus what sort of shots they're being used for. I'd expect a modern camera phone to be better than an old Fuji bridge camera, assuming it is the 2000hd this uses a small 1/2.3in sensor (similar size to mobile phones) and was not rated for image quality in its day. It did use a CCD sensor rather than CMOS (which most cameras use now) however some people do still prefer the colour and look of CCD sensors.
However if you prefer the look of the Fuji camera then what is technically 'better' is irrelevant because ultimately it's what you prefer.